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20 hours ago •
plotly
plotly
ggplotly crashes when AGG is required as graphical engine
I'm developing Shiny apps in a platform, where the graphical engine in RStudio (browser version) needs to be AGG.
When making interactive plots with ggplotly the app crashes when running from RStudio with the following error message:
Listening on http://127.0.0.1:7615
Warning: Error in dev_fun: X11 is not available
106: dev_fun
105: gg2list
104: ggplotly.ggplot
103: ggplotly
102: %>%
101: renderPlotly [/PATH_TO_APP/app.R#77]
100: func
97: shinyRenderWidget
96: func
83: renderFunc
82: output$distggPlotly
1: runApp
The static plots in the app are working fine, but the plotly variant causes the problem (see below).
app.R file
library(shiny)
library(tidyverse)
library(plotly)
ui <- fluidPage(
titlePanel("Old Faithful Geyser Data"),
sidebarLayout(
sidebarPanel(
sliderInput("bins", "Number of bins:", min = 1, max = 50, value = 30)
),
mainPanel(
plotOutput("distPlot"),
plotOutput("distggPlot"),
plotlyOutput("distggPlotly")
)
)
)
server <- function(input, output) {
output$distPlot <- renderPlot({
x <- faithful[, 2]
bins <- seq(min(x), max(x), length.out = input$bins + 1)
hist(x, breaks = bins, col = 'darkgray', border = 'white',
xlab = 'Waiting time to next eruption (in mins)',
main = 'Histogram of waiting times')
})
output$distggPlot <- renderPlot({
x <- faithful[, 2]
bins <- seq(min(x), max(x), length.out = input$bins + 1)
faithful %>% ggplot(aes(x = waiting)) +
geom_histogram(breaks = bins, fill = 'darkgray', colour = 'white') +
labs(x = 'Waiting time to next eruption (in mins)',
title = 'Histogram of waiting times')
})
output$distggPlotly <- renderPlotly({
x <- faithful[, 2]
bins <- seq(min(x), max(x), length.out = input$bins + 1)
gg_hist <- faithful %>% ggplot(aes(x = waiting)) +
geom_histogram(breaks = bins, fill = 'darkgray', colour = 'white') +
labs(x = 'Waiting time to next eruption (in mins)',
title = 'Histogram of waiting times')
gg_hist %>% ggplotly()
})
}
shinyApp(ui = ui, server = server)
Huh, I can't seem to replicate this, would you mind sharing your sessioninfo::session_info()? I have a hunch that upgrading the Rstudio IDE might fix the issue?
Thanks the for swift reply, @cpsievert. I think that the hint of updating the RStudio version is a very good first step (I've asked my sys admins to try this).
While waiting for this, I have posted the output you requested below
> session_info()
─ Session info ──────────────────────────────────────────────────────────────────────────────────────────────
setting value
version R version 4.2.3 (2023-03-15)
os AlmaLinux 8.7 (Stone Smilodon)
system x86_64, linux-gnu
ui RStudio
language (EN)
collate C.UTF-8
ctype C.UTF-8
tz UTC
date 2023-08-11
rstudio 2022.07.2+576 Spotted Wakerobin (server)
pandoc 2.18 @ /usr/lib/rstudio-server/bin/pandoc/ (via rmarkdown)
─ Packages ──────────────────────────────────────────────────────────────────────────────────────────────────
package * version date (UTC) lib source
bslib 0.4.2 2022-12-16 [5] CRAN (R 4.2.3)
cachem 1.0.7 2023-02-24 [5] CRAN (R 4.2.3)
cli 3.6.1 2023-03-23 [5] CRAN (R 4.2.3)
colorspace 2.1-0 2023-01-23 [5] CRAN (R 4.2.3)
crayon 1.5.2 2022-09-29 [5] CRAN (R 4.2.3)
data.table 1.14.8 2023-02-17 [1] CRAN (R 4.2.3)
digest 0.6.31 2022-12-11 [5] CRAN (R 4.2.3)
dplyr * 1.1.2 2023-04-20 [3] CRAN (R 4.2.3)
ellipsis 0.3.2 2021-04-29 [5] CRAN (R 4.2.3)
evaluate 0.20 2023-01-17 [5] CRAN (R 4.2.3)
fansi 1.0.4 2023-01-22 [5] CRAN (R 4.2.3)
farver 2.1.1 2022-07-06 [5] CRAN (R 4.2.3)
fastmap 1.1.1 2023-02-24 [5] CRAN (R 4.2.3)
forcats * 1.0.0 2023-01-29 [1] CRAN (R 4.2.3)
generics 0.1.3 2022-07-05 [5] CRAN (R 4.2.3)
ggplot2 * 3.4.2 2023-04-03 [5] CRAN (R 4.2.3)
glue 1.6.2 2022-02-24 [5] CRAN (R 4.2.3)
gtable 0.3.3 2023-03-21 [5] CRAN (R 4.2.3)
hms 1.1.3 2023-03-21 [1] CRAN (R 4.2.3)
htmltools 0.5.5 2023-03-23 [5] CRAN (R 4.2.3)
htmlwidgets 1.6.2 2023-03-17 [5] CRAN (R 4.2.3)
httpuv 1.6.9 2023-02-14 [5] CRAN (R 4.2.3)
httr 1.4.5 2023-02-24 [5] CRAN (R 4.2.3)
jquerylib 0.1.4 2021-04-26 [5] CRAN (R 4.2.3)
jsonlite 1.8.4 2022-12-06 [5] CRAN (R 4.2.3)
knitr 1.42 2023-01-25 [5] CRAN (R 4.2.3)
labeling 0.4.2 2020-10-20 [5] CRAN (R 4.2.3)
later 1.3.0 2021-08-18 [5] CRAN (R 4.2.3)
lazyeval 0.2.2 2019-03-15 [1] CRAN (R 4.2.3)
lifecycle 1.0.3 2022-10-07 [5] CRAN (R 4.2.3)
lubridate * 1.9.2 2023-02-10 [1] CRAN (R 4.2.3)
magrittr 2.0.3 2022-03-30 [5] CRAN (R 4.2.3)
memoise 2.0.1 2021-11-26 [5] CRAN (R 4.2.3)
mime 0.12 2021-09-28 [5] CRAN (R 4.2.3)
munsell 0.5.0 2018-06-12 [5] CRAN (R 4.2.3)
pillar 1.9.0 2023-03-22 [5] CRAN (R 4.2.3)
pkgconfig 2.0.3 2019-09-22 [5] CRAN (R 4.2.3)
plotly * 4.10.1 2022-11-07 [1] CRAN (R 4.2.3)
promises 1.2.0.1 2021-02-11 [5] CRAN (R 4.2.3)
purrr * 1.0.1 2023-01-10 [5] CRAN (R 4.2.3)
R6 2.5.1 2021-08-19 [5] CRAN (R 4.2.3)
ragg 1.2.5 2023-01-12 [1] CRAN (R 4.2.3)
Rcpp 1.0.10 2023-01-22 [5] CRAN (R 4.2.3)
readr * 2.1.4 2023-02-10 [1] CRAN (R 4.2.3)
rlang 1.1.0 2023-03-14 [5] CRAN (R 4.2.3)
rmarkdown 2.21 2023-03-26 [5] CRAN (R 4.2.3)
rstudioapi 0.14 2022-08-22 [5] CRAN (R 4.2.3)
sass 0.4.5 2023-01-24 [5] CRAN (R 4.2.3)
scales 1.2.1 2022-08-20 [5] CRAN (R 4.2.3)
sessioninfo * 1.2.2 2021-12-06 [7] CRAN (R 4.2.3)
shiny * 1.7.4 2022-12-15 [5] CRAN (R 4.2.3)
stringi 1.7.12 2023-01-11 [5] CRAN (R 4.2.3)
stringr * 1.5.0 2022-12-02 [5] CRAN (R 4.2.3)
systemfonts 1.0.4 2022-02-11 [1] CRAN (R 4.2.3)
textshaping 0.3.6 2021-10-13 [1] CRAN (R 4.2.3)
tibble * 3.2.1 2023-03-20 [5] CRAN (R 4.2.3)
tidyr * 1.3.0 2023-01-24 [5] CRAN (R 4.2.3)
tidyselect 1.2.0 2022-10-10 [5] CRAN (R 4.2.3)
tidyverse * 2.0.0 2023-02-22 [1] CRAN (R 4.2.3)
timechange 0.2.0 2023-01-11 [1] CRAN (R 4.2.3)
tzdb 0.3.0 2022-03-28 [1] CRAN (R 4.2.3)
utf8 1.2.3 2023-01-31 [5] CRAN (R 4.2.3)
vctrs 0.6.1 2023-03-22 [5] CRAN (R 4.2.3)
viridisLite 0.4.1 2022-08-22 [5] CRAN (R 4.2.3)
withr 2.5.0 2022-03-03 [5] CRAN (R 4.2.3)
xfun 0.38 2023-03-24 [5] CRAN (R 4.2.3)
xtable 1.8-4 2019-04-21 [5] CRAN (R 4.2.3)
yaml 2.3.7 2023-01-23 [5] CRAN (R 4.2.3)
[1] /opt/dataiku/R/R.lib/4.x