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Check fasta calculations

Open pkienzle opened this issue 4 years ago • 2 comments

Results for fasta sequence sld estimates differ from those for the Bio SLD calculator.

See https://github.com/SasView/sasmeta/issues/3

pkienzle avatar May 13 '21 15:05 pkienzle

Provide syntax for deuteration.

For labile H we need exchange percentage (default 90%) for the protein and D₂O percentage for the solvent (default 0%). For non-labile H we need deuteration percentage (default 0%). All three percentages can be present for the same material.

Perhaps x %D y %D2O z %exch? A little confusing since %wt and %vol are used in the context of (x %vol A // y % B // C).

[Note: moved to #35]

pkienzle avatar May 13 '21 15:05 pkienzle

See also https://github.com/SasView/sasview/issues/1847

[Note: moved to #71 ]

pkienzle avatar May 13 '21 16:05 pkienzle

Differences are described in detail in https://github.com/SasView/sasmeta/issues/3. No further checking of the calculations is required here, though there may be some more tickets produced as a result of the discussion therein.

pkienzle avatar Feb 26 '24 21:02 pkienzle