Peter VandeHaar

In a title like `20002_1220: Non-cancer illness code, self-reported: diabetes`, `20002_1220` is the UKB code for the phenotype, and `Non-cancer...` is the UKB name for the phenotype. In the JSON...

Unfortunately, the categories are not very balanced, so they will be hard to render on a PheWAS plot. There are large categories and dozens of categories with

I believe that this API endpoint is still missing some data. Some phenotypes are missing sections of the genome, because we ran out of disk space on the loading machine,...

For the metadata endpoint, what are you looking for? How's `/api/v1/metadata.json`: ``` { "build": "GRCh37", "description": "Analysis of UKB data by Ben Neale's lab, round 1, imputed using UK10K and...

1. Yeah, I agree, ref/alt is a pain. I need a script that automatically flips ref/alt to align with hg38. I have most of the necessary code in `pheweb detect-ref`....

> I have a PYTHON savvy graduate student, who can help to update your add_rsids.py script so that it allows: (1) swapped ref/alt allele; (2) the output files to keep...

Thanks for reporting this. @mktrost Should we be pushing people towards `master` or towards the latest tagged release? Does 1.0.14 need to be `tar`ed with libStatGen and uploaded and marked...

I think your screenshot missed part of the error on the right side.

1. What kind of machine are you running on? 2. Please post the results of `lsb_release -a` and `uname -a` and `free -m`. 3. Can you find that `.so` file,...

You should try to install miniconda and use that to install pheweb. There are instructions at https://github.com/statgen/pheweb/blob/master/etc/detailed-install-instructions.md#installing-on-linux-or-mac-with-miniconda3