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Output variability between runs/systems?

Open jfy133 opened this issue 1 year ago • 19 comments

We are in the process in updating nf-core/taxprofiler to include ganon 2.0

During the establishment of CI tests we found there is slight variability in the output (where ganon 1 did not).

More specifically, @sofstam identified that while ganon v2 output compositionally was OK on our local machines, when the tests ran again but on GitHub Actions, the output appeared to not add up to 100% (99.64%)

Is this to be expected with the new update?

@sofstam can provide more info if necessary :)

jfy133 avatar Feb 16 '24 08:02 jfy133