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WIP: Initial LSF support, based on hacked LSF in original qbatch, untested

Open gdevenyi opened this issue 8 years ago • 6 comments

Based on my LSF support I wrote into a custom maget for an ENIGMA site.

Not tested on a real cluster yet, but produces sensible looking outputs.

Concerns: How are blank #BSUB lines handled, not sure.

gdevenyi avatar Mar 22 '16 20:03 gdevenyi

Man, testing this is going to be a bit of a chore. OpenLava is GPL, but they don't supply binaries. Can't find any RPMs for Centos or debs for debian/ubuntu.

I'm going to reach out to my LSF user and ask them to test this out with their work.

gdevenyi avatar Mar 24 '16 01:03 gdevenyi

Need to somehow check LSF's walltime specification, it doesn't allow seconds.

I'm thinking of slicing off the seconds for walltime if specified, otherwise I can't use qbatch as a pipeline tool for all clusters.

gdevenyi avatar Mar 29 '16 21:03 gdevenyi

Testing in progress from my only LSF user.

gdevenyi avatar Apr 05 '16 16:04 gdevenyi

Needs serious rebuild for new qbatch features.

gdevenyi avatar Jun 21 '16 14:06 gdevenyi