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Probabilistic Inference on Noisy Time Series

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At the moment, it is working on unconstrained prior space.

Again to avoid dependency issues it should be possible (and informative) to recreate the Multinest sampling algorithm in Pints. See [here](https://arxiv.org/abs/0809.3437).

new method

1. Not many changes in PINTS luckily, just replacing a `np.array(x, copy=False)` with `np.asarray(x)` 2. Remaining errors are in `pycma`. These are already fixed in development but we'll need to...

Major numpy version is now available through pip, will likely require some changes

code and design

Hi @ben18785 ! We have a hierarchy of methods in the PINTS docs, here: https://github.com/pints-team/pints/blob/master/docs/source/index.rst I think this was a forerunner of your bigger & better interactive tool and the...

question
priority
documentation

Currently the MCMC methods operate in one of two ways: Form 1: ``` def ask(): if self._proposed is None: self._proposed = ... return self._proposed def tell(fx): if self._proposed is None:...

code and design
priority

It's the default stopping criterium, so would be nice to see its value during optimisations

easy win

Hey all, Recent change to nested sampling changed a method `set_posterior_samples` to `set_n_posterior_samples`. This is more clear, but wondering if it's consistent. For example, (1) there's also a `set_iterations` in...

code and design
priority

Most toy models / distributions currently have a single method that tests several things. These should be broken up into proper unit tests - [ ] test_toy_annulus_logpdf.py - [ ]...

code and design
testing
easy win

Makes it easier to find things

code and design
easy win