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Allow edit distance

Open scogi opened this issue 2 years ago • 0 comments

Very useful tool, thank you. I was wondering, whether, respectively how the calculations for collision probabilty and collision numbers can be adapted to allow arbitrary edit distances when doing the UMI clustering. This would make AmpUMI useful also for assessing UMI applications with more error-prone third-gen sequencing data (like in PMID: 33432244).

Thank you Best, Stefan

scogi avatar Mar 18 '22 14:03 scogi