PopGenome
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Extracting total non-synonymous and synonymous sites per alignment
Hi @pievos101
Is it possible to extract the total number of predicted non-synonymous and synonymous sites from a "GENOME" object created from on an in frame fasta alignment? I can get SNPs of either category but not invariant sites.
I've sent a question through your weebly site also, sorry for the duplication.
Best wishes, Jack