Support running workflows with FAST5 data

[tom114]

Describe your idea for a new feature

Allow IRIDA to launch workflows using FAST5 data.

Describe how you would access this feature?

This should work similar to launching workflows with single end or paired data. Select samples and add to the cart, select a pipeline, select fast5 data, launch pipeline.

Additional information

A few pieces would need touched for this change:

• UI changes to the pipeline launch page to allow selction of fast5 data.
• Additions to the server side of creating the submission to add fast5 data.
• Changes to the galaxy connectivity system, to accept fast5 data particularily https://github.com/phac-nml/irida/blob/development/src/main/java/ca/corefacility/bioinformatics/irida/service/analysis/workspace/galaxy/AnalysisWorkspaceServiceGalaxy.java and https://github.com/phac-nml/irida/blob/development/src/main/java/ca/corefacility/bioinformatics/irida/service/analysis/workspace/galaxy/AnalysisCollectionServiceGalaxy.java
• Ensuring the analysis results pages handle fast5 data in the input files tab and provenance data.

Much of the existing code for single end files could be reused for these features as the fast5 file is almost the same.