irida
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Investigate why NCBI upload job stops running
Describe the bug
After some time, NCBI upload jobs seem to stall and stop attempting to upload.
Steps to reproduce the problem
What were you doing when you encountered the problem?
- Submit multiple NCBI upload jobs
- Wait...
- NCBI upload jobs sit in
NEW
status and don't attempt upload
Expected behaviour
NCBI upload jobs continue to upload
Additional context
NCBI upload thread may have died and hasn't restarted. It would be worth investigating what happens if an uncaught exception is thrown in one upload, do the other uploads attempt to run?