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SpikeGLX connection and Saving Probe Areas Error

Open NecLabResources opened this issue 8 months ago • 1 comments

The latest version of NTE seems to run into errors when interfacing with the MPM pathfinder and SpikeGLX.

  1. When I use MPM pathfinder to drive the probe to my desired location, I wish to save this probe-areas.mat but get the following error: "Index in position 1 exceeds array bounds. Index must not exceed 1.

Error in neuropixels_trajectory_explorer>save_probe_positions (line 1727) 'rotation_angle',num2cell(probe_angles_cat(3,:)));

Error while evaluating Menu Callback."

  1. Additionally, when I try to establish a connection to SGLX, I get the following error: "Unrecognized function or variable 'probe_depths'.

Error in neuropixels_trajectory_explorer>update_probe_areas_coordinates (line 915) probe_depths, ...

Error in neuropixels_trajectory_explorer>connect_spikeglx (line 2379) update_probe_areas_coordinates(probe_atlas_gui);

Error while evaluating Menu Callback."

For the SGLX issue, I db-stepped to the " send_recording_areas" function and saw that the following variables are no longer part of the workspace (rather, it seems they have been replaced by similarly named variables, slightly different enough to break this function call?)

Any help clarifying/solving these two issues would be greatly appreciated!

NTE_sglx_error

NecLabResources avatar May 30 '24 00:05 NecLabResources