Andy Peters

We don't do post-processing or anything fancy to get those signals, they're usually that clear as-is. What's your prep - does the probe go through liquid or agar on it's...

Ah yeah going through a little saline sounds unlikely to have it all come off. For coating probes - it sounds like you're doing what we do, we think the...

We use 4% PFA, but I forgot we've been using a vibratome instead of a cryostat, so no sucrose, no idea if that affects the autofluorescence? On Tue, Feb 4,...

(here's a link to a thread talking about syncing digital inputs via open ephys: https://github.com/cortex-lab/KiloSort/issues/77 - hopefully that answers but let me know if not)

@takacsflora wrote that GUI - Flora: let me know if you want help cleaning up these issues or if they're quick fixes. I also changed the way the angle controls...

I'll look into it - what order are your CCF coordinates in? Doesn't look like the native AP/DV/ML since the size is a little small: 

Great, sounds like it's working then? Does the deepslice alignment work well enough for you that you can essentially skip the step of manually finding the CCF slices? If so,...

Thanks! The DeepSlice page is throwing errors for me (gave me one output on a test, but then started giving URL errors when I try to download subsequent alignments), I'll...