Pablo Moreno

On an orthogonal axis of solution I moved as well from nfs v3 to v4.2. So far it seems to help as well.

The requested tool does seem to be installed on web: 

Restarting the workflow and job containers made this work (but I haven't re-installing tools to see if they would be picked up).

Probably just using a nodejs won't do, as it needs the galaxy parts as well. Maybe a new container FROM the main galaxy one with nodejs installed on top? For...

The tool with the changes will work in the older container, which has correct versions of everything, but the conda pinnings were necessary for galaxy installations that use conda (there...

This setup fails running the following conda incantation: ``` conda install -c 'conda-forge' -c 'bioconda' 'scanpy=1.7.1' 'matplotlib=3.6.3' 'anndata=0.7.5' 'loompy=2.0.17' 'leidenalg=0.8.3' 'pandas=1.5.3' --strict-channel-priority -p /usr/local --copy --yes --quiet ``` locally however...

I currently have https://github.com/ebi-gene-expression-group/galaxy-gxa-tools-setup which duplicates partly your scripts in this repo. I thought of consuming this repo for the scripts and mine for the rest of the tools files...