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how to filter based on FREQ?

Open chunxuan-hs opened this issue 2 years ago • 0 comments

After annating by snpsift, how culd I filter based on FREQ?

For example, a record with the following annotation, and I would like to filter based on GnomAD. How should I write the expression? Many thanks!

FREQ=GENOME_DK:0.05556,.,0.9444,.|GnomAD:0.3163,.,0.6837,.|KOREAN:0.1405,0,0.8595,0|SGDP_PRJ:0.0181,0.002262,0.9751,0.004525|TOMMO:0.1327,.,0.8673,.|dbGaP_PopFreq:0.0779,.,0.9221,.

chunxuan-hs avatar Jul 24 '23 15:07 chunxuan-hs