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                                            Pierre Chaumeil

relative evolutionary divergence (RED) values and median RED values

Ticket closed due to inactivity.

Uncontrolled exit resulting from an unexpected error.

Hello, Do you still have this issue? If so, I can see you are using a custom_taxonomy, is this taxonomy with 7 ranks for all genomes ( domain to species)...

Uncontrolled exit resulting from an unexpected error.

Sorry, I am not aware of any tool to convert the NCBI taxonomy to a standard taxonomy with 7 ranks.

Total genome counter in log is off (warning message)

Hi, Thanks for your feedback, I will have a look at this. As you said , this will not affect the final GTDB-Tk results.