athenapk

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WIP: precipitator

6

This adds the precipitator pgen. (New PR to avoid issues with actions running on forks.) **This PR depends on:** * https://github.com/parthenon-hpc-lab/athenapk/pull/79 * https://github.com/parthenon-hpc-lab/athenapk/pull/80 * TODO: well-balanced reconstruction (for hydrostatic equilibrium)...

BenWibking

pgrete

Python analysis/plotting example: ```python import matplotlib.pyplot as plt import numpy as np import sys sys.path.insert( 1, "/home/pgrete/src/athenapk/external/parthenon" + "/scripts/python/packages/parthenon_tools/parthenon_tools", ) try: import phdf except ModuleNotFoundError: print("Couldn't find module to read...

pgrete

add cooling documentation

5

This adds a Markdown file with documentation on the convention for CIE cooling curves that is expected by AthenaPK, as well as documenting the approximations used in calculating the mean...

BenWibking

tracer particles

2

It would be useful to have tracer particles, following the [Parthenon example](https://github.com/parthenon-hpc-lab/parthenon/blob/88ece809dc56ae16d695db8d9051433bff01feb1/example/particle_tracers/particle_tracers.cpp>). We could even use the marker particle advection algorithm using the time-centered, face-centered velocities: https://ui.adsabs.harvard.edu/abs/1965PhFl....8.2182H/abstract

BenWibking

The cooling tables in the repository are inconsistent with the convention expected by AthenaPK (https://github.com/parthenon-hpc-lab/athenapk/pull/97). https://github.com/parthenon-hpc-lab/athenapk/tree/main/inputs/cooling_tables For temperatures about $10^{5.5}$ K where CIE is valid, this causes a 10-20% discrepancy...

BenWibking

Low-Mach correction for HLLC solver

6

Includes the low-mach correction for the pressure in the Riemann solver. Does not include carbuncle fix. Based on Minoshima & Miyoshi (2021). This is an updated version of PR https://github.com/parthenon-hpc-lab/athenapk/pull/57....

BenWibking

Reflecting BC

6

New version of https://github.com/parthenon-hpc-lab/athenapk/pull/58. (Renamed the branch and didn't realize the PR would be closed automatically.)

BenWibking

WIP: Test temperature based recon

2

pgrete

pgrete