PaperWM
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Visual artifacts when opening windows with mutter 3.36.4
3.36.3 (good)

3.36.4 (bad, notice the blue rectangles)

I bisected the mutter commit that introduced this down to https://gitlab.gnome.org/GNOME/mutter/-/commit/44a3358125317dbe2151cf0ac70ec2c382236881.
I can only reproduce this using PaperWM, vanilla GNOME doesn't seem to be affected.
Right, I suspected there might be some breakage when looking at the release notes.
Thanks for taking the time bisecting the problem. Will take a look.
With mutter 3.38.1 I have a lot of those too. More generally the whole user experience has been degraded with GNOME 3.38 (glitches, latencies, etc.), but nothing I can reproduce at will.
Still a problem (even worse maybe) with GNOME 43 + Xorg and develop branch :(
https://user-images.githubusercontent.com/3816409/196010349-fd28dfbe-6a7f-4ac7-be54-73cfb6599462.mp4
Thanks @shibotto, your comment re still happening on Gnome 43 caught my attention (I'm also on Gnome 43).
I didn't really notice it (but then again I prefer speeding up animation-time to 0.15). Changing animation-time to 0.99 you can see the selected actor being drawn with the rectangles you refer to for some of the windows.
Will have a look and see about cleaning up / improving the animation/tween used.
Hey @shibotto, sorry it took a while (was working on a few different things).
Anyways, checkout #501 - it should look much better (also I put up some before/after vids in that PR).