sleuth
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No beta with gene_mode = F
Hi there, I find that when using
sleuth_prep(gene_mode = F, ...)
sleuth_results(pval_aggregate = T)
I get no output for b, and many other columns (se_b, mean_obs, ...), while it should be there according to the documentation: https://www.rdocumentation.org/packages/sleuth/versions/0.30.0/topics/sleuth_results
However, when using the old method:
sleuth_prep(gene_mode = T, ...)
sleuth_results(pval_aggregate = F)
Then it works and I get all the expected columns. Or maybe I am missing something obvious here. Best, Jerome