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process 10xv2 single end read fastq files

Open ChaDuss opened this issue 4 years ago • 0 comments

Thank you for your wonderful tool, Is it possible to process 10xv2 single end read fastq files with kallisto bustool pipeline in order to perform rna velocity with scvelo ?

Your following tutorial is nice (https://www.kallistobus.tools/velocity_tutorial.html), but doesn't work with single end fastq files.

Thank you for your help.

Charles

ChaDuss avatar May 13 '20 13:05 ChaDuss