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Published 20 hours ago • verified publisher icon pachterlab

some question about paper

Open panxiaoguang opened this issue 5 years ago • 1 comments

I have read your paper, but there is a problem that I don't quite understand. The p value of genes is estimated by the p value of transcript difference analysis, and basemean in transcript difference analysis results is used as weight. If one gene id corresponds to multiple transcript ids, how to choose between basemean and p value? In addition, is there any difference between directly converting transcript id into gene id for GO enrichment analysis and gene enrichment analysis based on p-value estimation?

panxiaoguang avatar Jun 14 '19 06:06 panxiaoguang

@lakigigar @lynnyi Does this package/pipeline apply for isoform analysis on 10x Single-cell RNAseq data?

gadepallivs avatar May 01 '23 20:05 gadepallivs