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malloc(): smallbin double linked list corrupted
Describe the bug I am trying to go through the cluster step, needed to proceed to the detection part. After successfully running :
tadrep -v -o /home/datasets/tadrep/ database --type plsdb
tadrep characterize --db /home/datasets/tadrep/plsdb/plsdb.json --inc-types /home/datasets/tadrep/inc-types.fasta
Upon running the cluster command (with or without the "skip" option), I get:
**ERROR: Warning: Some seqs are too long, please rebuild the program with make parameter MAX_SEQ=new-maximum-length (e.g. make MAX_SEQ=10000000) Not fatal, but may affect results !!
malloc(): smallbin double linked list corrupted**
How are the sequences too long, being them from the plsdb I just downloaded? The log is attached. tadrep.log
Thanks
Hi @mtruglio, thanks a lot for reporting. We'll have a look at it and come back asap once we have figured out what exactly is causing this error.