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Published 20 hours ago • verified publisher icon oschwengers

Add IS element detection

Open oschwengers opened this issue 3 years ago • 2 comments

Bakta needs an IS element detection and annotation feature. A promising candidate (detection, annotation, recently updated, BioConda) is ISEScan:

  • https://github.com/xiezhq/ISEScan
  • https://doi.org/10.1093/bioinformatics/btx433

oschwengers avatar Aug 10 '20 19:08 oschwengers

MobileElementFinder is also an interesting option:

  • https://doi.org/10.1093/jac/dkaa390
  • https://cge.cbs.dtu.dk/services/MobileElementFinder

oschwengers avatar Sep 09 '21 08:09 oschwengers

:up: This feature !

Nilad avatar Jul 19 '22 08:07 Nilad