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Cannot use ScalaTask with a jar on a distant environment, "not found: value hello"

Open samthiriot opened this issue 5 years ago • 0 comments

Dear beloved OpenMole community,

I tried to replicate on version 12 snapshot the example "Hello" which calls a simple jar, and execute it on a remote environment, for instance with SSH (but SLURM fails with the same problem)

Here is the workflow:

val envSSH =
  SSHEnvironment(
    "login",
    "computer",,
    4 // The number of cores you want to use on the remote server
  )
  
val i = Val[Int]
val o = Val[String]

//Defines the task to perform the hello function
val javaTask = ScalaTask("val o = hello.Hello.run(i)") set (
  libraries += workDirectory / "Hello.jar",
  inputs += i,
  outputs += o
)

val aaa = CSVHook(workDirectory / "grid_results.csv")

DirectSampling(
  evaluation = javaTask on envSSH,// by 32 hook aaa,
    sampling =   
      (i in (0 to 100 by 1))
) hook aaa

We obtain this error:

Error in javaTask@1872798092 for context values {i=6, openmole$seed=-4308730587666908844}
org.openmole.core.exception.InternalProcessingError: Error in javaTask@1872798092 for context values {i=6, openmole$seed=-4308730587666908844}
	at org.openmole.core.workflow.tools.InputOutputCheck$.$anonfun$perform$1(InputOutputCheck.scala:126)
	at org.openmole.core.expansion.FromContext.apply(FromContext.scala:243)
	at org.openmole.core.expansion.FromContext.from(FromContext.scala:244)
	at org.openmole.core.workflow.task.Task.perform(Task.scala:104)
	at org.openmole.core.workflow.task.Task.perform$(Task.scala:102)
	at org.openmole.plugin.task.scala.ScalaTask.perform(ScalaTask.scala:70)
	at org.openmole.core.workflow.job.MoleJob.perform(MoleJob.scala:90)
	at org.openmole.core.workflow.execution.LocalExecutor.$anonfun$run$2(LocalExecutor.scala:62)
	at scala.collection.immutable.List.foreach(List.scala:333)
	at org.openmole.core.workflow.execution.LocalExecutor.$anonfun$run$1(LocalExecutor.scala:58)
	at org.openmole.core.workflow.execution.LocalExecutor.withRedirectedOutput(LocalExecutor.scala:122)
	at org.openmole.core.workflow.execution.LocalExecutor.run(LocalExecutor.scala:54)
	at java.base/java.lang.Thread.run(Thread.java:834)
Caused by: org.openmole.core.exception.UserBadDataError: (line 1) not found: value hello
    val o = hello.Hello.run(i)
            ^
Compiling code:
val o = hello.Hello.run(i)
With interpreter in osgi mode with priority bundles [org.openmole.core.expansion], libraries [/gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/tmp/1597849200000/1597851732651_8abb7bca-ead4-4957-af6b-f3442ec94008/ceb2049c-6849-4ec0-b870-e53612015259/.tmp/2438afaa-d571-4fd1-83db-bd1a0a415e42/replica8d5fca4d-e939-4540-87c7-df5f5aa9168b/Hello.jar], classpath [/gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/plugins/org-openmole-core-expansion_2.13-12.0-SNAPSHOT.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/persistent/1597850274793_29e9138d-a28a-4598-a4e2-74a0e63ac2c0, 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/gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/plugins/org-openmole-core-context_2.13-12.0-SNAPSHOT.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/plugins/org-openmole-core-authentication_2.13-12.0-SNAPSHOT.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/plugins/com-fasterxml-jackson-core-jackson-core_2.9.8.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/plugins/org-openmole-library-org-h2_2.13_1.4.200.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/plugins/org-openmole-core-code_2.13-12.0-SNAPSHOT.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/plugins/org-openmole-core-dsl_2.13-12.0-SNAPSHOT.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/envplugins/plugin3.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/envplugins/plugin2.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/envplugins/plugin0.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/envplugins/plugin6.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/envplugins/plugin9.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/envplugins/plugin5.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/envplugins/plugin8.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/install/3c787390-ce49-43a9-8ae9-386ceba68b54_install/runtime8628fbf7aea5da07816a2cac195ff9d7efca3969/envplugins/plugin1.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/tmp/1597849200000/1597851732651_8abb7bca-ead4-4957-af6b-f3442ec94008/ceb2049c-6849-4ec0-b870-e53612015259/.tmp/2438afaa-d571-4fd1-83db-bd1a0a415e42/replicadb90591e-a92a-4c4c-a093-9f0ec4ccb168/org-openmole-plugin-task-jvm_2.13-12.0-SNAPSHOT.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/tmp/1597849200000/1597851732651_8abb7bca-ead4-4957-af6b-f3442ec94008/ceb2049c-6849-4ec0-b870-e53612015259/.tmp/2438afaa-d571-4fd1-83db-bd1a0a415e42/replicab43c0ac2-8ffc-475a-b884-e4e8b62629c3/org-openmole-plugin-task-scala_2.13-12.0-SNAPSHOT.jar, /gpfsgaia/home/login/.openmole/.tmp/ssh/openmole-3c787390-ce49-43a9-8ae9-386ceba68b54/tmp/1597849200000/1597851732651_8abb7bca-ead4-4957-af6b-f3442ec94008/ceb2049c-6849-4ec0-b870-e53612015259/.tmp/2438afaa-d571-4fd1-83db-bd1a0a415e42/replica15fa334a-e9f9-4ed6-9e47-64855a6c37d9/org-openmole-plugin-task-external_2.13-12.0-SNAPSHOT.jar]."

	at org.openmole.core.expansion.ScalaCompilation$.compile(ScalaCompilation.scala:107)
	at org.openmole.core.expansion.ScalaCompilation$.function(ScalaCompilation.scala:129)
	at org.openmole.core.expansion.ScalaCompilation$.closure(ScalaCompilation.scala:133)
	at org.openmole.core.expansion.ScalaCompilation$.static(ScalaCompilation.scala:188)
	at org.openmole.plugin.task.scala.ScalaTask.compile(ScalaTask.scala:83)
	at org.openmole.plugin.task.scala.ScalaTask.$anonfun$process$2(ScalaTask.scala:118)
	at org.openmole.tool.cache.KeyValueCache.$anonfun$getOrElseUpdate$1(KeyValueCache.scala:22)
	at scala.collection.mutable.HashMap.getOrElseUpdate(HashMap.scala:446)
	at org.openmole.tool.cache.KeyValueCache.getOrElseUpdate(KeyValueCache.scala:22)
	at org.openmole.plugin.task.scala.ScalaTask.$anonfun$process$1(ScalaTask.scala:118)
	at org.openmole.core.expansion.FromContext.apply(FromContext.scala:243)
	at org.openmole.plugin.task.jvm.JVMLanguageTask$.$anonfun$process$2(JVMLanguageTask.scala:37)
	at org.openmole.core.workspace.TmpDirectory.withTmpDir(TmpDirectory.scala:38)
	at org.openmole.plugin.task.jvm.JVMLanguageTask$.$anonfun$process$1(JVMLanguageTask.scala:35)
	at org.openmole.core.expansion.FromContext.apply(FromContext.scala:243)
	at org.openmole.core.expansion.FromContext.from(FromContext.scala:244)
	at org.openmole.core.workflow.tools.InputOutputCheck$.$anonfun$perform$1(InputOutputCheck.scala:123)
	... 12 more

Any idea?

Tks :-)

Sam

samthiriot avatar Aug 19 '20 15:08 samthiriot