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Missing WBO OpenFF Full Optimization Benchmark 1

Open jthorton opened this issue 5 years ago • 2 comments

Some of the optimizations done as part of the OpenFF Full Optimization Benchmark 1 collection have missing WBO in the results despite it being requested, I think this is due to different qcengine versions on a manager which pulled down the job, meaning that for some molecules other connectivity checks are required.

Entry first gradient id wbo qcengine version
CC(=O)O[C@H]1Cc2ccccc2N(c3c1cccc3)C(=O)N-0 6479626 True v0.10.0
c1cc(c(cc1O)[C@@H]2CCN2)Br-0 3091838 False v0.7.1

jthorton avatar Apr 21 '20 13:04 jthorton

Having WBO data in these records will make benchmarking/validation much easier, since it would allow us to avoid using more approximate methods and WBO comparisons seem like they'll be the best way to catch unexpected things happening during optimization (proton transfer, h-bonds, etc.)

mattwthompson avatar Apr 21 '20 18:04 mattwthompson

Interesting. I suspect we'll have the resources to simply redo these jobs once the current gen2 fitting datasets are complete. I'll see if we can do some queue planning for the next few weeks at Thursday's QCFractal call.

j-wags avatar Apr 21 '20 19:04 j-wags