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Problem synchronisation

Open ghost opened this issue 3 years ago • 3 comments

Hello,

I have a problem of files synchronisation. Once I clone cobratoolbox, I get some of files in my folder but not all of them. I notice that the folders not cloned appear as 'binary @ e2c2603 '
'papers @ 535da20' 'tutorials @ f1e2483' on https://github.com/opencobra/cobratoolbox.

Thanks for the help

I hereby confirm that I have:

  • [ X] Tried to solve the issue on my own
  • [ X] Retried to run my code with the latest version of The COBRA Toolbox
  • [ X] Checked that a similar issue has not already been opened

ghost avatar Apr 27 '21 09:04 ghost

Hi, maybe you are missing curl which is required to pull in the external repos. https://opencobra.github.io/cobratoolbox/stable/installation.html#curl

On Tue, 27 Apr 2021 at 10:31, elliottpatelli @.***> wrote:

Hello,

I have a problem of files synchronisation. Once I clone cobratoolbox, I get some of files in my folder but not all of them. I notice that the folders not cloned appear as 'binary @ e2c2603 ' 'papers @ 535da20' 'tutorials @ f1e2483' on https://github.com/opencobra/cobratoolbox.

Thanks for the help

I hereby confirm that I have:

  • [ X] Tried to solve the issue on my own
  • [ X] Retried to run my code with the latest version of The COBRA Toolbox
  • [ X] Checked that a similar issue has not already been opened

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/opencobra/cobratoolbox/issues/1762, or unsubscribe https://github.com/notifications/unsubscribe-auth/AAQMEOXKEH2A73PF5RP2OIDTK2AADANCNFSM43UTUQTQ .

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Mr. Ronan MT Fleming B.V.M.S. Dip. Math. Ph.D.

Assistant Professor, Division of Systems Biomedicine and Pharmacology, Leiden Academic Centre for Drug Research, Faculty of Science, Leiden University. https://www.universiteitleiden.nl/en/staffmembers/ronan-fleming & H2020 Project Coordinator, Systems Medicine of Mitochondrial Parkinson’s Disease, http://sysmedpd.eu & Senior Lecturer, School of Medicine, National University of Ireland, Galway.

Peer-reviewed publications: https://goo.gl/FZPG23 Mobile: +353 852 109 806 Skype: ronan.fleming

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rmtfleming avatar Apr 27 '21 10:04 rmtfleming

Hello,

I have curl 7.68.0 and still have the same issue. I am installing it on Ubuntu 20.04 with git 2.25.1

ghost avatar Apr 27 '21 11:04 ghost

Hi, please post the full error and the config to https://groups.google.com/g/cobra-toolbox after searching for solutions there. Regards, Ronan

On Tue, 27 Apr 2021 at 12:04, elliottpatelli @.***> wrote:

Hello,

I have curl 7.68.0 and still have the same issue. I am installing it on Ubuntu 20.04 with git 2.25.1

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/opencobra/cobratoolbox/issues/1762#issuecomment-827520903, or unsubscribe https://github.com/notifications/unsubscribe-auth/AAQMEOUXAKKFCMBNGKVSM43TK2K5NANCNFSM43UTUQTQ .

--

Mr. Ronan MT Fleming B.V.M.S. Dip. Math. Ph.D.

Assistant Professor, Division of Systems Biomedicine and Pharmacology, Leiden Academic Centre for Drug Research, Faculty of Science, Leiden University. https://www.universiteitleiden.nl/en/staffmembers/ronan-fleming & H2020 Project Coordinator, Systems Medicine of Mitochondrial Parkinson’s Disease, http://sysmedpd.eu & Senior Lecturer, School of Medicine, National University of Ireland, Galway.

Peer-reviewed publications: https://goo.gl/FZPG23 Mobile: +353 852 109 806 Skype: ronan.fleming

(This message is confidential and may contain privileged information. It is intended for the named recipient only. If you receive it in error please notify me and permanently delete the original message and any copies.)

rmtfleming avatar Apr 27 '21 11:04 rmtfleming