Onur Sumer

Instructions provided by Juexin: ``` 1) #ssh to AWS EC2 instance hosting g2s ssh -i ~/.ssh/g2s.pem [email protected] 2) #EC2 using screen to host running SpringBoot. Stop SpringBoot and start tomcat8...

These instructions seem to be working. We should probably combine these in a single script which we can (auto)run every ~90 days.

#4348 seems like an easy target. #5700 and #6892 may be achieved without any change in the `igv.js` library. Not sure if these 3 issues have high priority though. #5390...

@jjgao I am not sure if IGV team is prioritizing these features. Maybe we should offer some help? I don't know how feasible for us to involve in active IGV...

Looks like changes introduced by https://github.com/cBioPortal/cbioportal/commit/ad8f6f5ae59afd4ffe35b781236c447af7498a76 causing discrepancy between the frontend and the backend when calculating the number of profiled cases for multiple studies. We can solve the issue by...

@inodb Allowing the filter to also have the full OQL spec might be tricky because I don't think we have oql parser implemented for backend. So it may not be...

Instead of a multi item menu, should we just add another simple slider with an input box (same UI with the Y-Axis Max) to control the number of visible labels?...

@jjgao if we pick amino acids mutated in >=x samples, then we have less granular control over the exact number of labels displayed in case of a tie. But maybe...

@jjgao @tmazor The workaround does not work in this case because the sample lists `genie_public_fusion` and `genie_private_fusion` do not exits in the database. Therefore we calculate the frequency based on...