mirp
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oncoray
Medical Image Radiomics Processor
Hi, apologies for ignoring the issue template but I don't think my inquiry fits the mold. I have 2 things I'd like to raise with you all. 1. It appears...
Your dependencies are clear to see in the pyproject.toml, but I would put a max on all of them. I'm hoping the package is around for a while, and if...
I agree with @theanega's comments regarding documentation. I suggest: 1. Adding your Statement of Need to the welcome page. 2. Adding near the top of the README some prose (outside...
Hi @alexzwanenburg. Thank you for updating the tutorial, this allows testing real world functionality much better. While testing out various functionality mentioned in the docs and the software report, I've...
Technically, it would be nice in terms of community guidelines if there was a clear statement about the maintainer and how to contact them. This is for me implied when...
1. FWIW, my investigations show ~75% test coverage. This isn't too bad, but it might be worth dedicating some spare time to lifting it a little, especially for the files...
Hi @alexzwanenburg. Great stuff putting this project together! Apologies for the delay in review, I hope you find the feedback useful. I'll separate my review items into individual issues. If...
There is currently no available python `3.12` wheels for the following packages: - `itk`: see InsightSoftwareConsortium/ITK#4449. Support for python `3.12` is slated for version `5.4.0` - `ray`: see ray-project/ray#45904. Support...
X-ray images are 2D projections based on attenuation of X-rays along the beam line. Their processing is particularly relevant for deep learning applications. - [x] Identify a dataset of X-rays...
`mirp` supports various modalities, including conventional magnetic resonance imaging. Apparent diffusion coefficient (ADC) maps can be computed from diffusion weighted imaging. Implementing import of ADC maps is not trivial, as...