Word test additions and old .doc document conversion

[Thomas-Rowlands]

Description

Implementation of word document text & table extraction.

Fixes #220

Type of change

• [ ] Documentation (non-breaking change that adds or improves the documentation)
• [x] New feature (non-breaking change which adds functionality)
• [ ] Optimization (non-breaking, back-end change that speeds up the code)
• [ ] Bug fix (non-breaking change which fixes an issue)
• [ ] Breaking change (whatever its nature)

Key checklist

• [x] All tests pass (eg. pytest)
• [ ] The documentation builds and looks OK (eg. mkdocs)
• [ ] Pre-commit hooks run successfully (eg. pre-commit run --all-files)

Further checks

• [ ] Code is commented, particularly in hard-to-understand areas
• [ ] Tests added or an issue has been opened to tackle that in the future. (Indicate issue here: # (issue))

[alexdewar]

PS -- you'll need to merge in main and resolve merge conflicts. If you do that then it'll also enable codecov for this PR so we can see what is/isn't covered by tests.

[codecov[bot]]

Codecov Report

Attention: Patch coverage is 55.84906% with 117 lines in your changes missing coverage. Please review.

Files with missing lines	Patch %	Lines
autocorpus/word.py	39.39%	53 Missing and 7 partials :warning:
autocorpus/bioc_supplementary.py	43.83%	41 Missing :warning:
autocorpus/file_processing.py	55.00%	4 Missing and 5 partials :warning:
autocorpus/ac_bioc/json.py	0.00%	5 Missing :warning:
autocorpus/ac_bioc/passage.py	94.44%	0 Missing and 1 partial :warning:
autocorpus/bioc_formatter.py	95.23%	0 Missing and 1 partial :warning:

Files with missing lines	Coverage Δ
autocorpus/ac_bioc/annotation.py	47.61% <100.00%> (+1.10%)	:arrow_up:
autocorpus/ac_bioc/bioctable/cell.py	100.00% <ø> (+14.28%)	:arrow_up:
autocorpus/ac_bioc/bioctable/collection.py	100.00% <ø> (+30.00%)	:arrow_up:
autocorpus/ac_bioc/bioctable/document.py	100.00% <ø> (+25.00%)	:arrow_up:
autocorpus/ac_bioc/bioctable/json.py	50.00% <ø> (-30.77%)	:arrow_down:
autocorpus/ac_bioc/bioctable/passage.py	100.00% <ø> (+55.00%)	:arrow_up:
autocorpus/ac_bioc/collection.py	89.74% <100.00%> (-1.75%)	:arrow_down:
autocorpus/ac_bioc/document.py	100.00% <100.00%> (ø)
autocorpus/ac_bioc/location.py	61.90% <100.00%> (+4.76%)	:arrow_up:
autocorpus/ac_bioc/node.py	90.47% <100.00%> (+5.47%)	:arrow_up:
... and 10 more

... and 1 file with indirect coverage changes

:rocket: New features to boost your workflow:

• :snowflake: Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

[Thomas-Rowlands]

Implemented the updates suggested. Further refactors will be made to the codebase with other PRs once the supplementary material features are in.