polyfun

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## Pull Request Title: Enhancements and New Features for Genetic Data Processing Code only modified for `finemapper.py` ### Summary of Changes This PR introduces several updates and new features to...

1511878618

Bgen input with an error caused by an incorrect variable invocation.

2

A bug for `--geno` is a bgen file with code like below: ``` bash python /home/xutingfeng/github_code/others/polyfun/finemapper.py --geno data.bgen --sumstats polyfun_sumstats.tsv --chr 1 --start 15333350 --verbose --allow-missing \ --end 15833356 \...

1511878618

The linear combination of ploypred with ployfun and bolt-lmm results in poorer prediction performance compared to using bolt-lmm alone

1

Hi, I successfully ran polypred without any errors, and the software also provided mixweight. One of the results is as follows: ``` polyfun 0.4593921186807445 bolt-lmm 0.8357840401238336 intercept -0.24858259149910983 ``` Subsequently,...

Y-Isaac

Issues on the number of chromosomes in different species (2)

1

First, thank you so much for accepting my request on the "--num-chr" option in the PolyFun package. Using the upadted option, we are now figuring out to execute the PloyFun...

heebokp