pannuke_datamodule.py is different between your installed package and github code.

[yellofi]

This is the code in cellseg_models_pytorch.datamodules.pannuke_datamodule.py in the python packages directory

This is the code in cellseg_models_pytorch.datamodules.pannuke_datamodule.py of your github code.

I installed your awesome package, cellseg_models_pytorch and am checking its running via 'pannuke_nuclei_segmentation_cellpose.ipynb'.

There was such a issue above. Could you check your examples with jupyter notebook do work?

[okunator]

Hi,

thanks for the heads up. I'll check the issue.

[yellofi]

I think your example of the cellpose with jupyter notebook had run using module of your github code.. I fixed errors on the jupyter notebook example since I modify the code of your package referring your in-github code.

I think the issue is from the change of order of 'phase' and 'fold' in fold_split.