segmentator
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ofgulban
3D MRI data exploration and segmentation tool.
Hello. i'm currently studying 3D implementation of Deriche filter and to my mind, i found a mistake in coefficients calculation. From your code (deriche_3D.pyx): `S = alpha*(S_p - S_n)` In...
hello dear Faruk, after lots of enjoyable work using your awesome segmentator, it now crashes my entire system when calling it. (and I see the login screen and my computer...
This might be a matplotlib backend issue. The mouse controls are fine but there is no middle click button on the magic mouse.
## Overall there are 4 changes to the code 1. Upgrade the code to be ready for Python 3.8 (using https://github.com/asottile/pyupgrade) 1. I added a slider to control the brightness...
Add utility functions and flags to command line interface to make compositional analysis interface more accessible. - [x] [Compoda](https://github.com/ofgulban/compoda) dependency is already introduced for smoothing filters at version 1.5.0. -...
We need to add the following files to fulfill the [recommended community standards](https://github.com/ofgulban/segmentator/community): - [ ] Code of conduct - [x] Contributing - [ ] Issue of pull request template
Inkscape style hold and drag nodes for circle/wedge on volume histogram plot for radius, theta min/max parameters can provide more intuitive controls: 
Some load options can be useful, such as: - [x] load a gradient magnitude image to bypass its calculation. - [ ] load a previous segmentation (acquired via other tools)...
I need to look into this, there seems to be an issue executing Segmentator within Python 3.12