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Initiate pattern review process with HPO

Open matentzn opened this issue 3 years ago • 2 comments

I propose the establishment of a workgroup between @rays22 and @LCCarmody for the purpose of reviewing HPO. This is how I envision this to work:

  1. We match pattern by pattern in an ongoing fashion (this is now standard in ODK and I already have implemented this today for HPO)
  2. We copy 5 patterns at once in a Google Sheet and have @LCCarmody review it
  3. Once reviewed, we use the "pattern merge workflow" to factor the updated definitions in hpo-edit.owl (remember, we are not using dosdp patterns directly in HPO)
  4. We keep a new directory "src/patterns/data/reviewed" where we copy all of the matched patterns after review is finished
  5. We keep matching-updating reviewed patterns so that changes can be monitored by @LCCarmody over time

Steps to get started:

  • [x] Upload first 5 templates from src/patterns/data/matches to a Google sheet and share with @LCCarmody
  • [ ] Set up a weekly call with @LCCarmody to discuss findings

Are you ok with this @LCCarmody and @rays22?

matentzn avatar Sep 16 '22 09:09 matentzn

My apologies, I didn't see this. Yes, I definitely think there are terms we could go over--and have weekly meetings

LCCarmody avatar Sep 21 '22 20:09 LCCarmody

Data tables for review: Human Phenotype Ontology (HPO) - EQ Review 2022/23

rays22 avatar Nov 04 '22 10:11 rays22