uberon
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obophenotype
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
Related to #2349 I created a `general_subset` containing terms that must be applicable outside of Metazoa. I'm open to suggestions for an alternative name for the subset. For all these...
**Preferred term label:** myotendinous junction of the semitendinosus tendon **Synonyms** MTJ of the semitendinosus tendon **Definition** (free text, please give PubMed ID)**Myotendinous junction (MTJ) is a part of the myotendinous...
This PR tries to resolve the 5 of 6 of the issues mentioned in #2424 (There are 2 new ones from the last time check was run) The problem that...
A general question in preparing new brain areas: There are areas in the brain that provide functionality for more than one sensory system. Should these areas be both “part of”,...
This PR tries to resolve the 6 of 6 of the issues mentioned in #2424 (There are 2 new ones from the last time check was run) The issue also...
This is related to #2495. This is a sample of the differences. # Ontology comparison ## Left - Ontology IRI: `http://purl.obolibrary.org/obo/uberon/uberon-simple.owl` - Version IRI: `http://purl.obolibrary.org/obo/uberon/releases/2022-09-23/uberon-simple.owl` - Loaded from: `file:/Users/anitac/Documents/GitHub/uberon-simple.owl` (current...
@balhoff My bad, I had not understood that the mere presence of these classes was enough. In this case I agree that we should have somewhere a build target in...
Remove the folling files from git index: - [ ] [add-to-uberon.pl](https://github.com/obophenotype/uberon/blob/master/add-to-uberon.pl) - [ ] [all remaining (non-released) subsets](https://github.com/obophenotype/uberon/blob/master/subsets) - [x] [assert-equivalent-classes-module.owl](https://github.com/obophenotype/uberon/blob/master/assert-equivalent-classes-module.owl) - [x] [composite-aba.obo](https://github.com/obophenotype/uberon/blob/master/composite-aba.obo) - [x] [deleted_axioms.obo](https://github.com/obophenotype/uberon/blob/master/deleted_axioms.obo) - [x] [disjoint_union_over.ofn](https://github.com/obophenotype/uberon/blob/master/disjoint_union_over.ofn)...
Related to https://github.com/obophenotype/uberon/pull/2633 Thanks to @bvarner-ebi for bringing this up Currently it is unclear in uberon if fissures/sulcus/incisure should be material or immaterial - do they refer to the fold...
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An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology