ncbitaxon
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Remove extra # symbol from IRIs of some taxonomic rank terms?
Three taxonomic rank terms appear to have an extra #
in their IRIs:
- http://purl.obolibrary.org/obo/NCBITaxon#_species_group
- http://purl.obolibrary.org/obo/NCBITaxon#_species_subgroup
- http://purl.obolibrary.org/obo/NCBITaxon#_taxonomic_rank
All other taxonomic rank IRIs use the prefix http://purl.obolibrary.org/obo/NCBITaxon_
.
Should the extra #
be removed from these IRIs?
Noting that none of the taxonomic rank terms have IRIs that resolve.
Should NCBITaxon use identifiers from the OBO TAXRANK ontology?
taxrank is probably a bigger decision, but I think it makes sense. Made a distinct issue #97
The odd URI issue is an unfortunate but known consequence of
- how we decided to model the URIs for the subsets
- how these are translated into obo format
It was probably a mistake for us to place the subsets directly in the NCBITaxon namespace, we don't own this. Should have been done the same way as go/uberon/doid/etc, which is suboptimal but predictable.
The decision is
- leave as is for now and make a bigger change to taxrank (#97) later
- change the namespace for the subset to be
obo:ncbitaxon#
(fixing the weirdness issue)