cell-ontology
cell-ontology copied to clipboard
Update diff to use base plus with new ODK
Reminder ticket to update automated diff to use base plus once that is ready with next ODK release
This issue has not seen any activity in the past 6 months; it will be closed automatically in one year from now if no action is taken.
Base plus is still not available.
Unless I missed something, “base plus“ artefacts are available now?
@matentzn (or anyone who followed the base-plus saga, really): Is the following correct?
- Prior to ODK 1.4, the ODK only provided an artefact called
-base, which was basically the-editfile, as in “the ontology as it is edited by its editors“ (with no imports and no reasoning). - The “base-plus” proposition was to add a new artefact that would contain all axioms that are “about” a term defined in the ontology (including inferred axioms); that is, no longer merely the contents of the
-editfile, but the result of the fully processed ontology from which axioms about “foreign“ terms are forcibly removed. - In ODK 1.5, what was actually implemented was that the
-baseartefact is now what was envisioned as “base-plus” (https://github.com/INCATools/ontology-development-kit/pull/810), while a new artefact called “baselite” (optional, not generated by default) corresponds to what used to be “base” (that is, the-editfile without reasoning).
Correct, unless cl.Makefile does not overwrite cl-base.owl, cl-base.owl is now what we referred to back in 2023 "base plus"