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Add EFO diameter terms

Open rays22 opened this issue 3 years ago • 1 comments

  • [ ] Find the appropriate DOS-DP pattern to create new OBA terms (provided they do not already exist) that correspond to the EFO terms in the table below.
  • [ ] Fill in the appropriate tsv data.
    • Check (e.g. using OLS) if the suggested filler terms are the best choices for the corresponding EFO term.
    • For a new OBA ID, use an available unique ID from your range.
  • [ ] Create an OBA pull request.
EFO:0007719 rdfs:label carotid artery external diameter quality Lexical PATO:0001334 diameter UBERON:0005396 carotid artery
EFO:0021826 rdfs:label proximal pulmonary artery diameter quality@en Lexical PATO:0001334 diameter UBERON:0002012 pulmonary artery
EFO:0007720 rdfs:label carotid artery internal diameter quality Lexical PATO:0001334 diameter UBERON:0005396 carotid artery
EFO:0021825 rdfs:label pulmonary artery root diameter quality@en Lexical PATO:0001334 diameter UBERON:0002012 pulmonary artery
EFO:0021787 oboInOwl:hasExactSynonym ascending aorta diameter Lexical PATO:0001334 diameter UBERON:0001496 ascending aorta
EFO:0021788 oboInOwl:hasExactSynonym descending aorta diameter Lexical PATO:0001334 diameter UBERON:0001514 descending aorta
EFO:0021786 oboInOwl:hasExactSynonym aorta diameter Lexical PATO:0001334 diameter UBERON:0000947 aorta

rays22 avatar Sep 29 '22 11:09 rays22

I created a NTR ticket in PATO for the terms internal diameter and external diameter https://github.com/pato-ontology/pato/issues/529 so as to map the EFO terms carotid artery internal and external diameters. I think that would be better than broadly mapping both terms to carotid artery diameter.

ar-ibrahim avatar Oct 13 '22 09:10 ar-ibrahim