Umbrella ticket for EFO/GWAS clinical temporal measurement-related traits

[rays22]

Create separate tickets for creating DOS-DP trait patterns related to

• [ ] disease prognosis measurement EFO:0007936
• [ ] disease recurrence EFO:0004952
• [ ] family history EFO:0000493
• [ ] illness severity status EFO:0007863
• [ ] remission EFO:0009785

These trait patterns would be used by GWAS.

[rays22]

There are 29 EFO Clinical temporal measurement combined terms to align with OBA :

	CLINICAL-TEMPORAL-TERM	CLIN-TEMP-TERM-ID	DISEASE-TERM	DISEASE-TERM-ID	MONDO_HP-TERM-ID	SUGGESTED-COMBINED-TERM	PMIDS
1	age at onset	EFO_0004847	cannabis use	EFO_0007585	MONDO:0005689	age at onset of cannabis use	25987507|30003630
2	age at onset	EFO_0004847	smoking initiation	EFO_0005670	MONDO:0008575	age at smoking initiation	24665060|31089300
3	age at diagnosis	EFO_0004918	cardiac arrhythmia	EFO_0004269	MONDO:0007263	age at onset of cardiac arrhythmia	32589924
4	age at diagnosis	EFO_0004918	hernia of the abdominal wall	HP_0004299	HP:0004299	age at onset of hernia of the abdominal wall	32589924
5	disease prognosis measurement	EFO_0007936	urinary bladder carcinoma	MONDO_0004986	MONDO:0004986	urinary bladder carcinoma prognosis measurement	31277774
6	disease prognosis measurement	EFO_0007936	Crohn's disease	EFO_0000384	MONDO:0005011	Crohn's disease prognosis measurement	28067912|29905830
7	disease prognosis measurement	EFO_0007936	non-small cell lung carcinoma	EFO_0003060	MONDO:0005233	non-small cell lung carcinoma prognosis measurement	34002017
8	disease progression measurement	EFO_0008336	HIV infection	EFO_0000764	MONDO:0005109	HIV progression measurement	28132517
9	disease progression measurement	EFO_0008336	non-small cell lung carcinoma	EFO_0003060	MONDO:0005233	non-small-cell lung cancer progression measurement	30207284
10	disease progression measurement	EFO_0008336	rheumatoid arthritis	EFO_0000685	MONDO:0008383	rheumatoid arthritis progression measurement	29065906
11	disease progression measurement	EFO_0008336	adolescent idiopathic scoliosis	EFO_0005423	MONDO:0005488	adolescent idiopathic scoliosis progression measurement	29016859
12	disease progression measurement	EFO_0008336	age-related macular degeneration	EFO_0001365	MONDO:0005150	age-related macular degeneration progression measurement	29346644|33751636
13	disease progression measurement	EFO_0008336	cerebral microbleeds	EFO_0010059	??	cerebral microbleed progression measurement	31209788
14	disease progression measurement	EFO_0008336	Churg-Strauss syndrome	EFO_0007208	MONDO:0015943	Churg-Strauss syndrome progression measurement	32009195
15	disease progression measurement	EFO_0008336	colorectal cancer	EFO_0005842	MONDO:0005575	colorectal cancer progression measurement	30738427
16	disease progression measurement	EFO_0008336	Crohn's disease	EFO_0000384	MONDO:0005011	Crohn's disease progression measurement	30801121
17	disease progression measurement	EFO_0008336	Duchenne muscular dystrophy	Orphanet_98896	MONDO:0010679	Duchenne muscular dystrophy progression measurement	30014611
18	disease progression measurement	EFO_0008336	Huntington disease	Orphanet_399	MONDO:0007739	Huntington disease progression measurement	28642124
19	disease progression measurement	EFO_0008336	Parkinson disease	MONDO_0005180	MONDO:0005180	Parkinson disease progression measurement	33111402|33958783
20	disease progression measurement	EFO_0008336	periprosthetic osteolysis	EFO_0009761	??HP:0002797	periprosthetic osteolysis progression measurement	30794219
21	disease progression measurement	EFO_0008336	urinary bladder carcinoma	MONDO_0004986	MONDO:0004986	bladder carcinoma progression measurement	31277774
22	disease recurrence	EFO_0004952	malaria	EFO_0001068	MONDO:0005136	malaria recurrence	31667592|32433338
23	disease recurrence	EFO_0004952	multiple sclerosis	MONDO_0005301	MONDO:0005301	multiple sclerosis recurrence	28739605|33704824
24	family history	EFO_0000493	coronary artery disease	EFO_0001645	MONDO:0005010	family history of coronary artery disease	33766035
25	illness severity status	EFO_0007863	hand, foot and mouth disease	EFO_0007294	MONDO:0005779	hand, foot and mouth disease severity measurement	32634583
26	remission	EFO_0009785	non-alcoholic steatohepatitis	EFO_1001249	MONDO:0007027	non-alcoholic steatohepatitis remission	31832568
27	remission	EFO_0009785	asthma	MONDO_0004979	MONDO:0004979	asthma remission	29786918
28	remission	EFO_0009785	hepatitis C virus infection	EFO_0003047	MONDO:0005231	hepatitis C virus remission	30593799|33119750
29	remission	EFO_0009785	unipolar depression	EFO_0003761	MONDO:0002009	unipolar depression remission	33589590