behavior-ontology

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NBO Styles and Conventions

9

Most of the original structure for the NBO was created over a decade ago. I have been looking at where things are currently and some of the contents may need...

DitchingIt

OBO Foundry Dashboard compliance

4

According to their [newsletter](https://obofoundry.org/newsletter/2023/09/15/second-issue-newsletter.html), from January 2024, existing OBO member ontologies will be sorted and promoted/relegated on the [Foundry Dashboard](http://dashboard.obofoundry.org/dashboard/index.html) according to their level of compliance. Reviewing our current status,...

DitchingIt

Adding a general term for chasing behavior

3

So right now the ontology has the two following terms: ``` [Term] id: NBO:0020040 name: chase prey def: "Active pursuit of fleeing prey." [] is_a: NBO:0020292 ! capturing behaviour disjoint_from:...

h-mayorquin

Adding term for perception of color and texture?

2

We have the current terms: ``` [Term] id: NBO:0000464 name: perception of motion behavior namespace: behavior_ontology def: "\"Perception relating to the process of inferring the speed and direction of elements...

h-mayorquin

Missing terms for sacaddes and fixation

3

We are working with an automated annotation tool for behaviors in neuroscience. Reading the following paper: Platt, M., Glimcher, P. Neural correlates of decision variables in parietal cortex. Nature 400,...

h-mayorquin

Use cases for NBO

32

## Background We know some of the [original aims](https://docs.google.com/document/d/1eSCjQfR5BujtUYw4W2pYOL6rhPPMycJd8u95X1-5U7Q/edit#) for merging the Animal Behavior Ontology (ABO) with the NBO, but things seem to have come off the rails: Leadership has...

DitchingIt

NBO Review

17

Judging by the lack of responses to my recent issues #122 and #123, and the many open issues, it looks like the NBO needs CPR. Without pretending to own it,...

DitchingIt

On the relationship of GO:Behavior with NBO:behavior process

15

So far I went under the assumption that NBO sort of extends the GO behavior branch. For our work in the phenotype ontology world we make extensive use of both,...

matentzn

Managing NBO and GO equivalent terms

5

- [ ] Make a report of all the behaviours that have an equivalent GO behaviour - [ ] Manual review of table - [ ] Obsolete all NBO equivalents...

matentzn

Align with and coordinate with BCIO

6

BCIO features heavily in the national academies report: https://nap.nationalacademies.org/catalog/26464/ontologies-in-the-behavioral-sciences-accelerating-research-and-the-spread https://www.ebi.ac.uk/ols/ontologies/bcio The emphasis is more on human behavior rather than comparative, but we should have a clear empirical picture of how...

cmungall