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obi-ontology
The Ontology for Biomedical Investigations
OBI frequently has the same concept or closely related concepts distributed across different BFO branches. Sometimes the different aspects are coordinated, and sometimes not: 1. MATERIAL: [syringe](http://purl.obolibrary.org/obo/OBI_0000422) - _A processed...
Half the OBI definitions have lang=en, the others are plain literals/strings ``` ➜ ontology git:(master) ✗ grep IAO_0000115 obi-edit.owl | grep -c lang= 656 ➜ ontology git:(master) ✗ grep IAO_0000115...
In May 13, 2024 review of another issue, we looked at the term 'perturbation device' (http://purl.obolibrary.org/obo/OBI_0001033) that has children 'homogenizer', 'sonicator', and 'vortexer'. The definition of this term is weak...
Preferred Term: long-read RNA sequencing assay Synonyms: long-read RNA-seq Definition: An assay that determines the sequence of an RNA molecule using single-molecule technologies to allow longer read lengths. Relevant info:...
Adds `ro_import.txt` and `ro_import.owl`, which include eight relations that OBI currently uses but wouldn't be getting from COB after integration, as discussed with James: - "has disposition" and "disposition of"...
At the 2024 COB workshop, it was raised that there is some dissatisfaction with the label of "processed material" (aka "processed material entity" in COB) among the non-OBI-developer community. There...
For example, integumentary system specimen, respiratory system specimen, etc.
Closes #1821. This pull request is a reorganization & cleanup of the specimen hierarchy to fix issues identified during the COB workshop. Changes are as follows: - Some terms from...
New terms added: ID | Label ---|--- OBI:0003683|Illumina HiSeq Series Instrument OBI:0003684|Illumina NextSeq Series Instrument OBI:0003685|Illumina NovaSeq Series Instrument