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NTR: sample collection - type of sample
Type of Sample Terms
- ROBOT table new term requests (`sample collection template)
-
GenEpiO ID (temporary)
andCuration Notes
annotations are for curation work and should be removed prior to ROBOT integration. - Most terms need a FINAL review and to be entered into OBI.
- Optional terms haven't undergone initial review.
ROBOT table URL (I#1582
tab sample-collection
template): https://docs.google.com/spreadsheets/d/1SiVgFDy9jOoFIhywvLjYLMBLqJsZ0B9An9170RYpQRM/edit#gid=553810270&range=A3
ontology ID | label |
---|---|
OBI:0002815 | food production sample |
OBI:0002836 | liquid food production sample |
OBI:0002837 | in-process food production sample |
amniocentesis | |
medical aspiration | |
OBI:0002893 | suprapubic aspiration |
OBI:0002894 | tracheal aspiration |
OBI:0002895 | vacuum aspiration |
OBI:0002896 | air filtration |
OBI:0003439 | gastric lavage |
OBI:0003440 | nasal lavage |
OBI:0003441 | transtracheal lavage |
OBI:0003442 | rinsing |
lumbar puncture | |
necropsy | |
phlebotomy | |
OBI:0003443 | saline gargle |
OBI:0003444 | scraping |
swabbing | |
OBI:0003445 | finger prick |
OBI:0003446 | washout tear collection |
OBI:0003447 | thoracentesis |
OBI:0003448 | messenger RNA extract |
OBI:0003449 | virus passage |
OBI:0003450 | post RT-PCR RNA re-extraction |
@ddooley