Modules not found upon fresh installation of nvim

[lxwbr]

Describe the bug After fresh installation of nvim and using the kickstart script I get errors below. Some modules seem to not be found.

To Reproduce Steps to reproduce the behavior:

1. Copy current master version of init.lua to ~/.config/nvim/init.lua.
2. Run nvim, wait until packer deps are installed
3. Exit nvim
4. Run nvim again

Desktop (please complete the following information):

• OS: macOS 12.6
• Terminal: kitty 12.6

** Neovim Version **

• Output of running :version from inside of neovim: NVIM v0.9.0-dev-525+ga7332ba9b

Error detected while processing /Users/alex/.config/nvim/init.lua:                                                                                                                                                    
E5113: Error while calling lua chunk: ...cker/start/nvim-treesitter/lua/nvim-treesitter/query.lua:2: module 'vim.treesitter.query' not found:                                                                         
        no field package.preload['vim.treesitter.query']                                                                                                                                                              
        no file './vim/treesitter/query.lua'                                                                                                                                                                          
        no file '/Users/runner/work/neovim/neovim/.deps/usr/share/luajit-2.1.0-beta3/vim/treesitter/query.lua'                                                                                                        
        no file '/usr/local/share/lua/5.1/vim/treesitter/query.lua'                                                                                                                                                   
        no file '/usr/local/share/lua/5.1/vim/treesitter/query/init.lua'                                                                                                                                              
        no file '/Users/runner/work/neovim/neovim/.deps/usr/share/lua/5.1/vim/treesitter/query.lua'                                                                                                                   
        no file '/Users/runner/work/neovim/neovim/.deps/usr/share/lua/5.1/vim/treesitter/query/init.lua'                                                                                                              
        no file './vim/treesitter/query.so'                                                                                                                                                                           
        no file '/usr/local/lib/lua/5.1/vim/treesitter/query.so'                                                                                                                                                      
        no file '/Users/runner/work/neovim/neovim/.deps/usr/lib/lua/5.1/vim/treesitter/query.so'                                                                                                                      
        no file '/usr/local/lib/lua/5.1/loadall.so'                                                                                                                                                                   
        no file './vim.so'                                                                                                                                                                                            
        no file '/usr/local/lib/lua/5.1/vim.so'                                                                                                                                                                       
        no file '/Users/runner/work/neovim/neovim/.deps/usr/lib/lua/5.1/vim.so'                                                                                                                                       
        no file '/usr/local/lib/lua/5.1/loadall.so'                                                                                                                                                                   
stack traceback:                                                                                                                                                                                                      
        [C]: in function 'require'                                                                                                                                                                                    
        ...cker/start/nvim-treesitter/lua/nvim-treesitter/query.lua:2: in main chunk                                                                                                                                  
        [C]: in function 'require'                                                                                                                                                                                    
        ...er/start/nvim-treesitter/lua/nvim-treesitter/configs.lua:3: in main chunk                                                                                                                                  
        [C]: in function 'require'                                                                                                                                                                                    
        /Users/alex/.config/nvim/init.lua:222: in main chunk                                                                                                                                                          
E484: Can't open file /share/nvim/syntax/syntax.vim                                                                                                                                                                   
Error in packer_compiled: /Users/alex/.config/nvim/plugin/packer_compiled.lua:206: Vim(packadd):E5113: Error while calling lua chunk: vim/_init_packages.lua:0: module 'vim.treesitter' not found:^@^Ino field package
.preload['vim.treesitter']^@^Ino file './vim/treesitter.lua'^@^Ino file '/Users/runner/work/neovim/neovim/.deps/usr/share/luajit-2.1.0-beta3/vim/treesitter.lua'^@^Ino file '/usr/local/share/lua/5.1/vim/treesitter.l
ua'^@^Ino file '/usr/local/share/lua/5.1/vim/treesitter/init.lua'^@^Ino file '/Users/runner/work/neovim/neovim/.deps/usr/share/lua/5.1/vim/treesitter.lua'^@^Ino file '/Users/runner/work/neovim/neovim/.deps/usr/shar
e/lua/5.1/vim/treesitter/init.lua'^@^Ino file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/share/lua/5.1/vim/treesitter.lua'^@^Ino file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/share/lua/5.1/v
im/treesitter/init.lua'^@^Ino file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/lib/luarocks/rocks-5.1/vim/treesitter.lua'^@^Ino file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/lib/luarocks/rock
s-5.1/vim/treesitter/init.lua'^@^Ino file './vim/treesitter.so'^@^Ino file '/usr/local/lib/lua/5.1/vim/treesitter.so'^@^Ino file '/Users/runner/work/neovim/neovim/.deps/usr/lib/lua/5.1/vim/treesitter.so'^@^Ino file
 '/usr/local/lib/lua/5.1/loadall.so'^@^Ino file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/lib/lua/5.1/vim/treesitter.so'^@^Ino file './vim.so'^@^Ino file '/usr/local/lib/lua/5.1/vim.so'^@^Ino file '/Use
rs/runner/work/neovim/neovim/.deps/usr/lib/lua/5.1/vim.so'^@^Ino file '/usr/local/lib/lua/5.1/loadall.so'^@^Ino file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/lib/lua/5.1/vim.so'^@stack traceback:^@^I[C
]: in function 'require'^@^Ivim/_init_packages.lua: in function '__index'^@^I...er/start/nvim-treesitter/lua/nvim-treesitter/parsers.lua:2: in main chunk^@^I[C]: in function 'require'^@^I...er/start/nvim-treesitter
/lua/nvim-treesitter/install.lua:6: in main chunk^@^I[C]: in function 'require'^@^I...ack/packer/start/nvim-treesitter/lua/nvim-treesitter.lua:1: in main chunk^@^I[C]: in function 'require'^@^I.../packer/start/nvim
-treesitter/plugin/nvim-treesitter.lua:9: in main chunk^@^I[C]: in function 'cmd'^@^I/Users/alex/.config/nvim/plugin/packer_compiled.lua:206: in function </Users/alex/.config/nvim/plugin/packer_compiled.lua:10>^@^I
[C]: in function 'pcall'^@^I/Users/alex/.config/nvim/plugin/packer_compiled.lua:10: in main chunk                                                                                                                     
Please check your config for correctness
Error detected while processing /Users/alex/.local/share/nvim/site/pack/packer/start/nvim-lspconfig/plugin/lspconfig.lua:                                                                                             
E5113: Error while calling lua chunk: vim/_init_packages.lua:0: module 'vim.lsp' not found:                                                                                                                           
        no field package.preload['vim.lsp']                                                                                                                                                                           
        no file './vim/lsp.lua'                                                                                                                                                                                       
        no file '/Users/runner/work/neovim/neovim/.deps/usr/share/luajit-2.1.0-beta3/vim/lsp.lua'                                                                                                                     
        no file '/usr/local/share/lua/5.1/vim/lsp.lua'                                                                                                                                                                
        no file '/usr/local/share/lua/5.1/vim/lsp/init.lua'                                                                                                                                                           
        no file '/Users/runner/work/neovim/neovim/.deps/usr/share/lua/5.1/vim/lsp.lua'                                                                                                                                
        no file '/Users/runner/work/neovim/neovim/.deps/usr/share/lua/5.1/vim/lsp/init.lua'                                                                                                                           
        no file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/share/lua/5.1/vim/lsp.lua'                                                                                                                      
        no file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/share/lua/5.1/vim/lsp/init.lua'                                                                                                                 
        no file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/lib/luarocks/rocks-5.1/vim/lsp.lua'                                                                                                             
        no file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/lib/luarocks/rocks-5.1/vim/lsp/init.lua'                                                                                                        
        no file './vim/lsp.so'                                                                                                                                                                                        
        no file '/usr/local/lib/lua/5.1/vim/lsp.so'                                                                                                                                                                   
        no file '/Users/runner/work/neovim/neovim/.deps/usr/lib/lua/5.1/vim/lsp.so'                                                                                                                                   
        no file '/usr/local/lib/lua/5.1/loadall.so'                                                                                                                                                                   
        no file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/lib/lua/5.1/vim/lsp.so'                                                                                                                         
        no file './vim.so'                                                                                                                                                                                            
        no file '/usr/local/lib/lua/5.1/vim.so'                                                                                                                                                                       
        no file '/Users/runner/work/neovim/neovim/.deps/usr/lib/lua/5.1/vim.so'                                                                                                                                       
        no file '/usr/local/lib/lua/5.1/loadall.so'                                                                                                                                                                   
        no file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/lib/lua/5.1/vim.so'                                                                                                                             
stack traceback:                                                                                                                                                                                                      
        [C]: in function 'require'                                                                                                                                                                                    
        vim/_init_packages.lua: in function '__index'                                                                                                                                                                 
        ...te/pack/packer/start/nvim-lspconfig/plugin/lspconfig.lua:1: in main chunk                                                                                                                                  
Error detected while processing /Users/alex/.local/share/nvim/site/pack/packer/start/cmp_luasnip/after/plugin/cmp_luasnip.lua:                                                                                        
E5113: Error while calling lua chunk: ...e/pack/packer/start/cmp_luasnip/lua/cmp_luasnip/init.lua:2: module 'vim.lsp.util' not found:                                                                                 
        no field package.preload['vim.lsp.util']                                                                                                                                                                      
        no file './vim/lsp/util.lua'                                                                                                                                                                                  
        no file '/Users/runner/work/neovim/neovim/.deps/usr/share/luajit-2.1.0-beta3/vim/lsp/util.lua'                                                                                                                
        no file '/usr/local/share/lua/5.1/vim/lsp/util.lua'                                                                                                                                                           
        no file '/usr/local/share/lua/5.1/vim/lsp/util/init.lua'                                                                                                                                                      
        no file '/Users/runner/work/neovim/neovim/.deps/usr/share/lua/5.1/vim/lsp/util.lua'                                                                                                                           
        no file '/Users/runner/work/neovim/neovim/.deps/usr/share/lua/5.1/vim/lsp/util/init.lua'                                                                                                                      
        no file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/share/lua/5.1/vim/lsp/util.lua'                                                                                                                 
        no file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/share/lua/5.1/vim/lsp/util/init.lua'                                                                                                            
        no file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/lib/luarocks/rocks-5.1/vim/lsp/util.lua'                                                                                                        
        no file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/lib/luarocks/rocks-5.1/vim/lsp/util/init.lua'                                                                                                   
        no file './vim/lsp/util.so'                                                                                                                                                                                   
        no file '/usr/local/lib/lua/5.1/vim/lsp/util.so'                                                                                                                                                              
        no file '/Users/runner/work/neovim/neovim/.deps/usr/lib/lua/5.1/vim/lsp/util.so'                                                                                                                              
        no file '/usr/local/lib/lua/5.1/loadall.so'                                                                                                                                                                   
        no file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/lib/lua/5.1/vim/lsp/util.so'                                                                                                                    
        no file './vim.so'                                                                                                                                                                                            
        no file '/usr/local/lib/lua/5.1/vim.so'                                                                                                                                                                       
        no file '/Users/runner/work/neovim/neovim/.deps/usr/lib/lua/5.1/vim.so'                                                                                                                                       
        no file '/usr/local/lib/lua/5.1/loadall.so'                                                                                                                                                                   
        no file '/Users/alex/.cache/nvim/packer_hererocks/2.1.0-beta3/lib/lua/5.1/vim.so'                                                                                                                             
stack traceback:                                                                                                                                                                                                      
        [C]: in function 'require'                                                                                                                                                                                    
        ...e/pack/packer/start/cmp_luasnip/lua/cmp_luasnip/init.lua:2: in main chunk                                                                                                                                  
        [C]: in function 'require'                                                                                                                                                                                    
        ...ck/packer/start/cmp_luasnip/after/plugin/cmp_luasnip.lua:1: in main chunk