Nitesh Turaga

Hi @lgatto and @bschilder No, i've not addressed this yet. It's an issue passed down from `rocker/rstudio` I belive.

Thanks for the PR @jwokaty. The overall size of the docker image currently is much larger by about 750MB (approx) ``` bioconductor/bioconductor_docker jw-update 337ddea798d9 45 hours ago 4.65GB bioconductor/bioconductor_docker devel...

Hi Jennifer, These are all very good questions. I will try to answer the ones which I’m able to, > > So in docker, we should be installing apt dependencies...

Thanks @jwokaty, I will review this today/tomorrow.

I'm able to reproduce the issue you are having with the R/RStudio version mismatch, ``` Warning messages: 1: R graphics engine version 15 is not supported by this version of...

Even the issue of R/RStudio version mismatch comes from `rocker/rstudio:devel`. I launched the `rstudio:devel` docker container and am able to reproduce this. The next step is to explore the rocker-versioned2...

Hi @pmoris Happy new year. First, I'm not sure about the `installBioc.r` script; I've personally never looked at it or used it. So for the sake of reproducibility of the...

Hi @seandavi and @mtmorgan, The `bioconductor_full` image will not be a complete replica of the linux build system although it's very very close. There are a few reasons for this,...

The reason for the `bioc` user in the image is to give the users another option other than `rstudio`. The rights and permissions to the bioc user are identical. I...

@mtmorgan `rstudio` is created earlier in the hierarchy as it comes from the rocker images. It might be easier to add this as part of the modifications which need to...