Noah Spies

Sorry for the delay in responding -- if you're looking to plot the sequence of the reference genome (when zoomed in) this isn't currently available but wouldn't be too hard...

Happy to accept pull requests on this. I couldn't get the link you shared to work, not sure if it's a mybinder problem or a setup issue ("Repository fomightez/genomeview-binder/master is...

This is great! Since you've already gotten things working with cython, I'd say not to worry about it for this purpose. I'll open a separate issue to look into performance...

closed by #32

Hi all, I've long since left academia and don't have bandwidth to support svviz2 which is both old and only unofficially released. Unfortunately, this appears to be a packaging issue,...

Happy to accept pull requests!

To clarify that I understand correctly, we should: 1. find repeats that overlap any breakpoint 2. for each such repeat, count how many reads fully span that repeat plus x...

@jzook when you're back on the job, can you email me some contigs and commands you've tried to use here? ideally so it runs on our cluster here so I...

Unfortunately this is not possible and I’m unlikely to have the time to add any major new features to svviz2 moving forward. Pull requests are welcomed, however, if you feel...

Can you explain a little more what's hard to see and how to improve it? An example or two might be helpful.