clinical_concept_extraction
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noc-lab
Clinical Concept Extraction with Contextual Word Embedding
Hi, I met a problem that I can't solve. Could you please help look at this issus. Thx a lot! It may occur at traning.py line 184 as below: `...
Changed the code structure into more efficient way to separate graphs building of prediction process
**the following are the main updates:** - created the ClinicalConceptExtraction class who contains the elmo model graph and clinical concept graph built and loaded in initiate time to avoid building...
WARNING: Logging before flag parsing goes to stderr. W0714 15:30:27.634637 140453550819136 deprecation_wrapper.py:119] From /mnt/c/Users/m.elkasaby/Desktop/clinical_concept_extraction/clinical_concept_extraction/elmo_vector.py:17: The name tf.placeholder is deprecated. Please use tf.compat.v1.placeholder instead. W0714 15:30:27.645177 140453550819136 deprecation_wrapper.py:119] From /mnt/c/Users/m.elkasaby/Desktop/clinical_concept_extraction/clinical_concept_extraction/bilm.py:744: The...
For tensorflow 1.14.0 in Goolge colab, getting this error `Can't instantiate abstract class DatasetV1 with abstract methods _as_variant_tensor, _inputs`. The proposed fix is removing the `()` For reference https://github.com/titu1994/neural-image-assessment/issues/51
I got an error as below: clinical_concept_extraction/elmo_vector.py", line 24, in __init__ self.session = tf.Session(config=config) File "/usr/lib/tensorflow/lib/python3.6/tensorflow/python/client/session.py", line 1563, in __init__ super(Session, self).__init__(target, graph, config=config) File "/usr/lib/tensorflow/lib/python3.6/tensorflow/python/client/session.py", line 633, in __init__...
