nireg
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Brain image registration package
.. -- rest -- .. vim:syntax=rst
===== NIREG
Image registration package for Python.
Website
Current information can always be found at the NIPY project website <http://nipy.org>
_.
Mailing Lists
For questions on how to use nipy or on making code contributions, please see
the neuroimaging
mailing list:
https://mail.python.org/mailman/listinfo/neuroimaging
Please report bugs at github issues:
https://github.com/nipy/nireg/issues
You can see the list of current proposed changes at:
https://github.com/nipy/nireg/pulls
Code
You can find our sources and single-click downloads:
-
Main repository
_ on Github; - Documentation_ for all releases and current development tree;
- Download the
current development version
_ as a tar/zip file; - Downloads of all
available releases
_.
.. _main repository: http://github.com/nipy/nireg .. _Documentation: http://nipy.org/nipy .. _current development version: https://github.com/nipy/nireg/archive/master.zip .. _available releases: http://pypi.python.org/pypi/nireg
Tests
To run nipy's tests, you will need to install the nose_ Python testing package. Then::
python -c "import nireg; nireg.test()"
Dependencies
To run NIREG, you will need:
- python_ >= 2.5 (tested with 2.5, 2.6, 2.7, 3.2, 3.3)
- numpy_ >= 1.2
- scipy_ >= 0.7.0
- nibabel_ >= 1.2
You will probably also like to have:
- ipython_ for interactive work
- matplotlib_ for 2D plotting
- mayavi_ for 3D plotting
.. _python: http://python.org .. _numpy: http://numpy.scipy.org .. _scipy: http://www.scipy.org .. _nibabel: http://nipy.org/nibabel .. _ipython: http://ipython.org .. _matplotlib: http://matplotlib.org .. _mayavi: http://code.enthought.com/projects/mayavi/ .. _nose: http://nose.readthedocs.org/en/latest
License
We use the 3-clause BSD license; the full license is in the file LICENSE
in the nipy distribution.