PySurfer
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nipy
Cortical neuroimaging visualization in Python
Hello Team, I tried to install PySurfer and followed the steps given on the GitHub page. After installation, I just ran the demo code for displaying the aparac.2009 parcellations. I...
When I tried to install PySurfer by type _sudo python setup.py install_ in the terminal, but got error saying _Traceback (most recent call last): File "setup.py", line 10, in from...
A recent update to some software broke PySurfer for me. After initialising with 'ipython --pylab qt' and running 'from surfer import Brain', I get an error that reads: ``` Qt...
Dear PySurfers, I have improved the "project_volume_data" function in surfer.io. It now accepts an additional optional argument "subjects_dir" of type str (default: None), which overrides the SUBJECTS_DIR environment variable in...
I am getting some artifacts when I try to use the threshold argument when visualizing a numpy array in pysurfer. I was unable to install pysurfer on a Mac running...
I have had a similar issue that others have reported, which forcing backface culling seems to fix, [referenced here](https://github.com/nipy/PySurfer/issues/258). However, I am having trouble implementing a script fix such as...
Hi， I used on macOS (10.12) with Jupiter notebook (python ver 3.8.5). The pysurfer version is 0.11.0. I tried to project the MNI volume result into the surface. But the...
I recently upgraded from Ubuntu 18 to 20, and updated my NVIDIA drivers to 460.39, and now pysurfer is not displaying parcellations and labels correctly anymore. From certain angles, the...
I made the following changes to plot SEEG electrodes and task-related activations: - Brain.add_foci can now map values using foci color and size. - added Brain.add_text3d for labeling foci in...
Hi, If I understand correctly, there is no function could be used directly to draw the boundary of a ROI mask, such FFA from a functional localizer? Thanks!
