mriqc
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dwi key is not defined for group report generation
What happened?
The dwi key is not defined in the QCGROUPS dictionary in mriqc/reports/groups.py
l.46
What command did you use?
mriqc /data/datasets/hcph /data/derivatives/hcph-derivatives/mriqc_23.2.0/ --verbose-report group -vv
What version of the software are you running?
23.2.0
How are you running this software?
Local installation ("bare-metal")
Is your data BIDS valid?
Yes
Are you reusing any previously computed results?
No
Please copy and paste any relevant log output.
Traceback (most recent call last):
File "/home/cprovins/.local/bin/mriqc", line 8, in <module>
sys.exit(main())
File "/home/cprovins/code/mriqc/mriqc/cli/run.py", line 217, in main
group_html(
File "/home/cprovins/code/mriqc/mriqc/reports/group.py", line 238, in gen_html
for group, units in QCGROUPS[mod]:
KeyError: 'dwi'
Additional information / screenshots
No response
I literally had the same issue. I am using dcm2bids to convert all my data into BIDS format. All my datasets are T1w. I ran the MRIQC on participant level without problem, but when I try to do group I ran into the same error of :"dwi"
A quick work around that seems to work while waiting for a FIX is to set --modalities T1w T2w bold