fmriprep
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Move HTML reports to subject or session folder
Doing this will make subject- or session-wise data more easily shareable. A few ideas:
- Create a new flag to determine the location of the HTML report.
- Move the figures folder into the session folder.
- Create an index HTML file at the top level to make it easier to open subject- or session-wise reports without having to navigate to each folder.
In QSIPrep, we're planning to add a --report-output-level parameter that accepts a value of root, subject, or session, with the default being root. See https://github.com/PennLINC/qsiprep/issues/848.