No dwi derivatives in output directory

[maryjis]

What happened?

dmriprep version: dMRIPrep v0.5.0+30.g510ed0ea Python version: Python 3.7.1 Operating System: Docker I run the following commands: git clone https://github.com/nipy/dmriprep, cd dmriprep, make docker Description With the latest docker image, run gets completed with no errors. But no output dwi directory gets created and only brain mask and bo reference.

Only anat, fmap and figures are in dmriprep output directory.

What command did you use?

docker run -ti -v "$PWD/COBRE_BIDS_test:/inputs" -v "$PWD/COBRE_dmri_preproc_test_fs:/outputs"  nipreps/dmriprep:latest dmriprep /inputs /outputs participant --skip-bids-validation --fs-no-reconall.

What version of the software are you running?

dMRIPrep v0.5.0+30.g510ed0ea

How are you running this software?

Docker

Is your data BIDS valid?

No

Are you reusing any previously computed results?

No

Please copy and paste any relevant log output.

No response

Additional information / screenshots

No response