niehu2018

Results 2 issues of niehu2018

Refer to https://satijalab.org/loomr/loomr_tutorial when I run `lfile$map(FUN = rowSums, chunk.size = 500)` It report "Error in private$reset_batch() : attempt to apply non-function" So, what should I do to get the...

$ macs2 callpeak -t /public/home/niehu/projects/Lulab20170712/pipeline/E9_5/out/align/rep2/E9_5_2_R1.trim.PE2SE.nodup.tn5.tagAlign.gz -f BED -n "/public/home/niehu/projects/Lulab20170712/pipeline/E9_5/out/peak/macs2/rep2/E9_5_2_R1.trim.PE2SE.nodup.tn5.pf" -g "mm" -p 0.01 --nomodel --shift -75 --extsize 150 -B --SPMR --keep-dup all --call-summits INFO @ Tue, 25 Jul 2017 12:33:24:...